Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGVSEGTRGCSDRQPGVLTRDRSCSRKMNSSGCLSEEV-GSLRPLTVVILSASIVVGVLGNGLVLWMTVFRMARTVS-TVCFFHLALADFMLSLSLPIAMYYIVSRQWLLGEWACKLYITFVFLSYFASNCLLVFISVDRCISVLYPVWALNHRTVQRASWLAFGVWLLAAALCSAHLKFRTTRKWNGCTHCYLAFNSDNETAQIWIEGVVEGHIIGTIGHFLLGFLGPLAIIGTCAHLIRAKLLREGWVHANRPKRLLLVLVSAFFIFWSPFNVVLLVHLWRRVMLKEIYHP-------RMLLILQASFALGCVNSSLNPFLYVFVGRDFQEKFFQSLTSALARAFGEEEFLSSCPRGNAPRE |
| 4XT1 Chain:A ((27-318)) | -----------------------------DATPCVFTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLD------SVPCTLLTACFYVAMFASLCFITEIALDRYYAIVY----MRYRPVKQACLFSIFWWIFAVIIAIPHFMV-VTKKDNQCM-------TDYDYLE------VSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLK--LLKWISSSCEFERSLKRALILTESLAFC--HCCLNPLLYVFVGTKFRQELHCLLAEFR--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244689 for 2012 contacts (-121.6/contact) +
2D Compatibility (PS) -28622 + (NN) -6514 + (LL) 4492
1D Compatibility (HY) -35600 + (ID) 4150
Total energy: -315083.0 ( -156.60 by residue)
QMean score : 0.256
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