Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTTSSAAPPSLGVEFISLLAIILLSVALAVGLPGNSFVVWSILKRMQKRSVTALMVLNLALADLAVLLTAPFFLHFLAQGTWSFGLAGCRLCHYVCGVSMYASVLLITAMSLDRSLAVARPFVSQKLRTKAMARRVLAGIWVLSFLLATPVLAYRTVVPWKTNMSLCFPRYPSEGHRAFHLIFEAVT-------GFLLPFLAVVASYSDIGRRL-QARRFRRSRRTGRLVVLIILTFAAFWLPYHVV----NLAEAGRALAGQAAGLGLVGKRLSLARNVLIALAFLSSSVNPVLYACAGGGLLRSAGVGFVAKLLEGTGSEASSTRRGGSLGQTARSGPAALEPGPSESLTASSPLKLNELN |
| 4RWA Chain:A ((128-392)) | -----------------------LYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRP-RDGAVVCMLQFPSPS-----WYWDTVTKICVFLFAFVVPILIITVCYGLMLL--GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALHLC-----------IALGYANSSLNPVLYAFLDENFKRCFRQLC---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203239 for 1783 contacts (-114.0/contact) +
2D Compatibility (PS) -25410 + (NN) -11216 + (LL) 4524
1D Compatibility (HY) -22000 + (ID) 3950
Total energy: -261291.0 ( -146.55 by residue)
QMean score : 0.305
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