Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNSTHRGMHTSLHLWNRSSYRLHSNASESLGKGYSDGGCYEQLFVSPEVFVTLGVISLLENILVIVAIAKNKNLHSPMYFFICSLAVADMLVSVSNGSETIVITLLNSTDTDAQSFTVNIDNVIDSVICSSLLASICSLLSIAVDRYFTIFYALQYHNIMTVKRVGIIISCIWAACTVSGILFIIYSDS------------SAVIICLIT--------MFFTMLA-------LMASLYVHMFLMARLHIKRIAVLPGTGAIRQGANMK---GAITLTILIGVFVVCWAPFFLHLI--FYISCPQNPYCVCFMSHFNLYLILIMCNSIIDPLIYALRSQELRKTFKEIICCYPLGGLCDLSSRY |
| 4UHR Chain:A ((12-303)) | -------------------------------------------------VELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIAISTGFCAACHGCLFIACFVLVLTA-------SSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKAGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLP--LHIINCFTFFCPDC-HAPLWLMY--LAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFKAAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -234601 for 1913 contacts (-122.6/contact) +
2D Compatibility (PS) -26000 + (NN) -3281 + (LL) 2876
1D Compatibility (HY) -26000 + (ID) 4250
Total energy: -291256.0 ( -152.25 by residue)
QMean score : 0.204
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