Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMEPREAGQHVGAANGAQEDVAFNLIILSLTEGLGLGGLLGNGAVLWLLSSNVYRNPFAIYLLDVACADLIFLGCHMVAIVPDLLQGRLDFPGFVQTSLATLRFFCYIVGLSLLAAVSVEQCLAALFPAWYSCRRPRHL--TTCVCALTWALCLLLHLLLSGACTQFFGEPSRHLCRTLWLVAAVLLALLCCTMCGASLMLLLRVERGPQRPPPRGFPGLILLTVLLFLFCGLPFGIYWLSRNLLWYIPHYFYHFSFLMAAVHCAAKPVVYFCLGSAQGRRLPLRLVLQRALGDEAELGAVRETSRRGLVDIAA |
4PY0 Chain:A ((48-166)) | -------------------------------------GLITNGLAMRIFFQIRSKSNFIIFLKNTVISDLLMILTFPFKILSDAK--TGPLRTFVCQVTSVIFYFTMYISISFLGLITIDRYQKTTR--------PKNLLGAKILSVVIWAFMFLLSLPNMILTNRQPRDKNVKKCSFLKSEFGLVWHEIVNYICQVIFWINFLIVIVCYTLITKELYRSYVRTADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PY0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87167 for 677 contacts (-128.8/contact) +
2D Compatibility (PS) -11256 + (NN) -4673 + (LL) 2784
1D Compatibility (HY) -10400 + (ID) 1150
Total energy: -111862.0 ( -165.23 by residue)
QMean score : 0.264
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