Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLELDEYYNKTLATENNTAATRNSDFPVWDDYKSSVDDLQYFLIGLYTFVSLLGF---MGNLLILMALMKKRNQKTTVNFLIGNLAFSDILVVLFCSPFTLTSVLLDQWMFGKVMCHIMPFLQCVSVLVSTLILISIAIVRYHMIKHPISNN--LTANHGYFLIATVWTLGFAICSPLPVFHSLVELQETFGSAL-LSSRYLCVESWPSDSYRIAFTISLLLVQYILPLVCLTVSHTSVCRSISCGLSNKENRLEENEMINLTLHPSKKS------GPQVKLSGSHKWSYSFIKKHRRRYSKKTACVLPAPERPSQE---------NHSRILP--ENFGSVRS--------QLSSSSKFIPGVPTCFEIKPEENSDVHEL-------------RVKRSVTRIKK----------RSRSVFYRLTILILVFAVSWMPLHLFHVVTDFNDNLISNRHFKLVYCICHLLGMMSCCLNPILYGFLNNGIKADLVSLIHCLHM |
| 3NY8 Chain:A ((40-462)) | ------------------------------------------WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIWTLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVS-GLTSFLPI--QMHWYRATHQEAINCYAEETCCDFFTNQAYAIASSI----VSFYVPLVIMVFVYSRVFQEAKRQL-NIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETG--VAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIR----KEVYILLNWIGYVNSGFNPLIYCRSPDFRIAFQELLCL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224826 for 2471 contacts (-91.0/contact) +
2D Compatibility (PS) -36756 + (NN) -695 + (LL) 3404
1D Compatibility (HY) -33600 + (ID) 4600
Total energy: -297073.0 ( -120.22 by residue)
QMean score : 0.174
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