Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSIINTSYVEITTFFLVGMPGLEYAHIWISIPICSMYLIAILGNGTILFIIKTEPSLHGPMYYFLSMLAMSDLGLSLSSLPTVLSIFLFNAPETSSSACFAQEFFIHGFSVL--ESSV--LLIMSFDRFLAIHNPLRYTSILTTVRVAQIGIVFSFKSMLLVLPFPFTLRSL---------RYCKKNQLSHSYCLHQDVMKLACSDNRIDVIYGFFGALCLMVDFILIAVSYTLIL------------KTVPGIASKKEELKALNTCVSHICAVIIFYLPIINLAVVHRFA------GHVSPLINVLMANVLLLVPPLMKPIVYCVKTKQIRVRVVAKLCQWKI |
3VG9 Chain:A ((15-296)) | ----------------------------------AIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITI------STGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAK--GII----AICWVLSFAIGLTPMLGWNNCGQSQGCGEGQVA---CLFEDVVPM-----NYMVYFNFFA--CVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSH-APLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3VG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -212676 for 1787 contacts (-119.0/contact) +
2D Compatibility (PS) -24913 + (NN) -7454 + (LL) 4628
1D Compatibility (HY) -30400 + (ID) 3500
Total energy: -274315.0 ( -153.51 by residue)
QMean score : 0.298
|
|
|