Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLGSLGNSSSSVSATFLLSGIPGLERMHIWISIPLCFMYLVSIPGNCTILFIIKTERSLHEPMYLFLSMLALIDLGLSLCTLPTVLGIFWVGAREISHDACFA--QLFFIHCFSFL--ESSV--LLSMAFDRFVAICHPLHYVSILTNTVIGRIGLVSLGRSVALIFPLPFMLKRFPYCGSPVLSHSYCLHQEVMKLAC--ADMKANSIYGMFVIVSTVGIDSLLILFSYALIL----RTVLSIASR---AERF-----KALNTCVSHICAVLLFYTPMIGLSVIHRFGKQAPHLVQVVMGFMYLLF-----PPVMNPIVYSVKTKQIRDRVTHAFCY |
| 3VG9 Chain:A ((8-297)) | -----------------------------VYITVELAIAVL-AILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAI--------TISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAK--GIIAICWVLSFAIGLTPMLG-WNNCGQ-------SQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238763 for 1822 contacts (-131.0/contact) +
2D Compatibility (PS) -25678 + (NN) -3872 + (LL) 2704
1D Compatibility (HY) -27200 + (ID) 3550
Total energy: -296359.0 ( -162.66 by residue)
QMean score : 0.200
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