Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPNMTSIREFILLGFTDNPELQVVIFFFMLITYLLSVSGNMIIIMLTLSNIHLKTPMYFFLRNFSFLEISFTTVFIPRFLINIATGDTTISYNASMAQVFFLILLGSTEFFLLAVMSYDRYVAICKPLHYTTIMSNKVCNWLVISSWLAGFLIIFPPVIMGLQLDFCDSSTIDHFICDSSPMLLIAC--TDTQFLELMAFLLAVFTLMVTLALVVLSYTLILKTILK---------IPSAQQR---KKAFSTCSSHMIVVSVSYGSC----------IFMCVKTSAKEGMALSKGVAVLNTSVAPMLNPFIYTLRNQQVKQALREFTKKILSLNKQ |
3REY Chain:A ((18-305)) | ---------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIP-FAITISTGFCAACHGCLFIACFVLVLAQSSIFSLLAI-AIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPM---LGWNNCGQP--------GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGL-FALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTN--SVVNPFIYAYRIREFRQTFRKIIRS------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3REY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -229791 for 1906 contacts (-120.6/contact) +
2D Compatibility (PS) -25919 + (NN) -6296 + (LL) 5176
1D Compatibility (HY) -22400 + (ID) 3150
Total energy: -282380.0 ( -148.15 by residue)
QMean score : 0.219
|
|
|