Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGVNDSSLQGFVLMGISDHPQLEMIFFIAILFSYLLTLLG---NSTIILLSRLEARLHTPMYFFLSNLSSLDLAFATSSVPQMLINLWGPGKTISYGGCITQLYV----FLWLGATECIL---------------LVVMAFDRYVAVCRPL------RYTAIMNPQLCWLLAVIACLGGLGNSVIQSTFTLQLPLCGHRRVEGFLCEVPAMIKLACG-------DTSLNQAVLNGVCTFFTAVPLSIIVISYCLIAQAVLKIRSAEGRRKAFNTCLS--------------HLLVVFLFYGSASYGYLLPAKNSKQDQGKF---ISLFYSLVTPMVNPLIYTLRNMEVKGALRRLLGKGREVG |
| 3DQB Chain:A ((43-326)) | --------------------------------YMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLF-------------------MVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMA-LACAAP--------------PLVGWSRY------IPEGMQCSCGIDYYTPHEETNNESFV--IYMFVVHFIIPLIVIFFCY-GQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAF-YIFTHQGS--DFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177961 for 1580 contacts (-112.6/contact) +
2D Compatibility (PS) -23933 + (NN) -4440 + (LL) 4992
1D Compatibility (HY) -29200 + (ID) 3600
Total energy: -234142.0 ( -148.19 by residue)
QMean score : 0.264
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