Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLGNESSLMDFILLGFSDHPRLEAVLFVFVLFFYLLTLVG---NFTIIIISYLDPPLHTPMYFFLSNLSLLDICFTTSLAPQTLVNLQRPKKTITYGGCVAQLYISLALGSTECILLADMALDRYIAVCKPLHYVVIMNPRLCQQLASISWLSGLASSLIHATFTLQLPLCGNHRLDHFICEVPALLKLACV-------DTTVNELVLFVVSVLFVVIPPALISISYGFITQAVLRIKSVEARHKAFST---CSSHLTVVII------------FYGTIIYVYLQPSDSYAQDQGKFISLFYTMVTPTLNPIIYTLRNKDMKEAL-RKLLSGKL |
| 3C9L Chain:A ((43-325)) | --------------------------------YMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS-----NFRFGENHA----IMGVAFTWVMALACAAPPLVGWSRY------IPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYG---QLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMT-IPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170130 for 1950 contacts (-87.2/contact) +
2D Compatibility (PS) -26260 + (NN) -6862 + (LL) 4656
1D Compatibility (HY) -22800 + (ID) 3300
Total energy: -224696.0 ( -115.23 by residue)
QMean score : 0.326
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