Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIPQNITEFFMLGLSQNSEVQRVLFVVFLLIYVVTVCGNMLIVVTITSSPTLASPVYFFLANLSFIDTFYSSSMAPKLIADSLYEGRTISYECCMAQLFGAHFLGGVEIILLTVMAYDRYVAICKPLHNTTIMTRHLCAMLVGVAWLGGFLHSLVQLLLVLWLPFCGPNVINHFACDLYPLLEVACTNTYVIGLLVVANSGLICLLNFLMLAASYIVILYSLRSHSADGRCKALSTCGAHFIVVALFFVPC--------IFTYVHPFSTL-PIDKNMALFYGILTPMLNPLIYTLRNEEVKNAMRKLFTW
3CAP Chain:A ((23-317))---PFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPI----NFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENH---AIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCC


General information:
TITO was launched using:
RESULT:

Template: 3CAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -269007 for 2205 contacts (-122.0/contact) +
2D Compatibility (PS) -29126 + (NN) -10674 + (LL) 840
1D Compatibility (HY) -22400 + (ID) 3150
Total energy: -333517.0 ( -151.25 by residue)
QMean score : 0.299

(partial model without unconserved sides chains):
PDB file : Tito_3CAP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CAP-query.scw
PDB file : Tito_Scwrl_3CAP.pdb: