Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKSNSSVVSEFVLLGLCSSQKLQLFYFCFFSVLYTVIVLGNLLIILTVTSDTSLHSPMYFLLGNLSFVDICQASFATPKMIADFLSAHETISFSGCIAQIFFIHLFTGGEMVLLVSMAYDRYVAICKPLYYVVIMSRRTCTVLVMISWAVSLVHTLSQLSFTVNLPFCGPNVVDSFFCDLPRVTKLACL--DSYIIEILIVVNSGILSLSTFSLLVSSYIIILVTV--WLKSSAAM----AKAFSTL------ASHIAVVILFFGPC--------IFIYVWP-FTISPLD-KFLAIFYTVFTPVLNPIIYTLRNRDMKAAVRKIV-NHYLRPRRISEMSLVVRTSFH |
| 4UHR Chain:A ((21-312)) | --------------------------------------ILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIA--ISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNN---CGQPKEGKA---GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-HAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFKAAAA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215730 for 1929 contacts (-111.8/contact) +
2D Compatibility (PS) -26622 + (NN) -3729 + (LL) 4408
1D Compatibility (HY) -26000 + (ID) 3650
Total energy: -271323.0 ( -140.65 by residue)
QMean score : 0.228
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