Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIANNTVVTEFILLGLTQSQDIQLLVFVLILIFYLIILPGNFLIIFTIRSDPGLTAPLYLFLGNLAFLDASYSFIVA-PRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEGLLLVVMAFDRYIAICRPLHCSTVMNPRACYAMMLALWLGGFVHSIIQVVLILRLPFCGPNQLDNFFC----DVRQVIKLACTDMFVVELLMVFNSGLMTLLCFLGLLASYAVILCHVR--------------RAASEGKNKAMSTCTTRVIII---LLMFGP-AIFIYMCPFRAL----PADKMVSLFHTVIFPLMNPMIYTLRNQEVKTSMKRLLSRHVVCQVDFIIRN
3AYM Chain:A ((64-336))-----------------------------------------------------SLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFG------WGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMS---VSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKET


General information:
TITO was launched using:
RESULT:

Template: 3AYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -178615 for 1795 contacts (-99.5/contact) +
2D Compatibility (PS) -24745 + (NN) -4278 + (LL) 6512
1D Compatibility (HY) -22800 + (ID) 2850
Total energy: -226776.0 ( -126.34 by residue)
QMean score : 0.217

(partial model without unconserved sides chains):
PDB file : Tito_3AYM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AYM-query.scw
PDB file : Tito_Scwrl_3AYM.pdb: