Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANLDKYTETFKMGSNSTSTAEIYCNVTNVKFQYSLYATTYILIFIPGLLANSAALWVLCRFISKKNKAIIFMINLSVADLAHVLSLPLRIYYYISHHWPFQRALCLLCFYLKYLNMYASICFLTCISLQRCFFLLKPFRARDWKRRYDVGI-SAAIWIVVGTACLPFPILRSTDLNNNK-SCFADLGYKQMNAVALVGMITVAELAGFVIPVIIIAWCTWKTTISLRQPPMAFQGISERQKAL----RMVFMCAAVFFICFTPYHINFIFYTMVKETIISSCPVVRIALYFHPFCLCLASLCCLLDPILYYFMASEFRDQLSRHGSSVTRSRLMSKESGSSMIG |
| 5C1M Chain:A ((24-293)) | ----------------------------------------YSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWENLLKICVF--IFAFIMPVLIITVCYGLMILRLKSVRM-LSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHI----YVIIKALI--TIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCF----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -276875 for 1930 contacts (-143.5/contact) +
2D Compatibility (PS) -27143 + (NN) -8816 + (LL) 4428
1D Compatibility (HY) -31600 + (ID) 3700
Total energy: -343706.0 ( -178.09 by residue)
QMean score : 0.249
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