Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQMADAATIATMNKAAGGDKLAELFSLVPDLLEAANTSGNASLQLPDLWWELGLELPDGAPPGHPPGSGGAESADTEARVRILISVVYWVVCALGLAGNLLVLYLMKSMQGWRKSSINLFVTNLALTDFQFVLTLPFWAVENALDFKWPFGKAMCKIVSMVTSMNMYASVFFLTAMSVTRYHSVASALKSHRTRGHGRGDCCGRSLGDSCCFSAKALCVWIWALAALASLPSAIFSTTVKVMGEELCLVRFPDKLLGRDRQFWLGLYHSQKVLLGFVLPLGIIILCYLLLVRFIADRRAAGTKGGAAVAGGRPTGASA--RRLSKVTKSVTIVVLSFFLCWLPNQA-LTTWSILIKFNAVPFSQEYFLCQVYAFPVSVCLAHSNSCLNPVLYCLVRREFRKALKSLLWRIASPSITSMRPFTATTKPEHEDQGLQAPAPPHAAAEPDLLYYPPGVVVYSGGRYDLLPSSSAY |
| 4RWA Chain:A ((112-405)) | ---------------------------------------------------------------------GARSASSLA-LAIAITALYSAVCAVGLLGNVLVMFGIVRYTKM-KTATNIYIFNLALADALATSTLPFQSAKYLME-TWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAK---------------AKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSP-----SWYWDTVTKICVFLFAFVVPILIITVCY-------------GLMLL---------GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLV-------VAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205392 for 2137 contacts (-96.1/contact) +
2D Compatibility (PS) -29348 + (NN) -12322 + (LL) 8856
1D Compatibility (HY) -27600 + (ID) 4850
Total energy: -270656.0 ( -126.65 by residue)
QMean score : 0.329
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