Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSYKFLKEVLHRLKNIENTLKVLDQSQL----NVEDKVEQMGLLEEIRHEIISHNIIKESLAEA-GTP--SNKKKGDSWQLKLIERMHKSNSAIPIDLVKSLSKVKIECQNLRRLSQSEPSS-----LEKLKERFA---DLVKLIRGVVSIKSQQLKCSKYDSLLADYDSDITEKDVKEIFPKLGKFFSDNIDRIIEKQKKDKIT---NTQKIATQKQ--IELGSLC-----LQQIGVTSHH-TFYHHPID------YDESDFCYGLFLLLRYSGHEIYQRCLAQNSISSSFTRYI---MCETQGLFMERMIGTSREFIEFIQPYIKEKLTIKGKVNAKINSVENLYLIFNKVNLSSPLKKADEFSLLANIMLRTKLEQDIINGTLEVKDLHDAWLEGMEHYKIPVKAKNELDTYFQDEYWVSGTMGYFPIKIIALIIAVQIFSFIKKNHYEFLGAIIKGDFGLLIGWLSQNVCSAKCGFLD--LLKKVTGKGLDVECCSSYLSEKYDLSQ |
| 1WGZ Chain:A ((24-505)) | ------------------GALAAWDQRTMIPKKGHEHRARQMAALARLLHQRMTDPRIGEWLEKVEGSPLVQDPLSDAAVNVREWRQAYERARAIPERLAVELAQAESEAESF--WEEARPRDDWRGFLPYLKRVYALTKEKAEVLFALPPAPGDPPYGELYDALLDGYEPGMRARELLPLFAELKEGLKGLLDRILGSGKRPDTSILHRPYPVEAQRRFALELLSACGYDLEAGRLDPTAHPFEIAIGPGDVRITTRYYEDFFNAGIFGTLHEMGHALYEQGLPKEHWGTPRGDAVSLGVHESQSRTWENLVGRSLGFWERFFPRAREVFASLGDV-----SLEDFHFAVNAVEPSLIRVEADEVTYNLHILVRLELELALFRGELSPEDLPEAWAEKYRDH-LGVAPKDYKDGVMQDVHWAGGLFGYFPTYTLGNLYAAQFFQKAEAELGPLEPRFARGEFQPFLDWTRARIHAEGSRFRPRVLVERVTGEAPSARPFLAYLEKKYAALY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210179 for 3374 contacts (-62.3/contact) +
2D Compatibility (PS) -47452 + (NN) -18746 + (LL) 2372
1D Compatibility (HY) -14800 + (ID) 5500
Total energy: -294305.0 ( -87.23 by residue)
QMean score : 0.463
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