Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCFMFLEFLFSTLFIMLIMVLSVFQIILVVILVILVLLQPPGSSSLSGFSNSQ--QGFNSIIPVKSSANPLNKITAIVAGLFIMNTLLLSGLCSKDVHKKSIAEKIILEKQQENESTSVPFEN
3DIN Chain:E ((9-73))
------------------------HTIISVALIYMVQVQMSKFSELGGAFGSGGLHTV---FGRRKGLDTGGKITLVLSVLFFVSCVVTAFV-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3DIN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19392 for 309 contacts (-62.8/contact) +
2D Compatibility (PS) -6701 + (NN) -2949 + (LL) 5740
1D Compatibility (HY) -5600 + (ID) 700
Total energy: -29602.0 ( -95.80 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_3DIN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DIN-query.scw
PDB file :
Tito_Scwrl_3DIN.pdb
: