Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDYLRIS-IGSLNEKNFHVIYTNKKYHLIAEDLQNISTIDQTSLYVKDIIKRVLLIGSTSIVISHNHSSGNTQPSSRIYPSLGS
4MQW Chain:X ((107-177))
-LQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNN
General information:
TITO was launched using:
RESULT:
Template:
4MQW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4099 for 455 contacts (9.0/contact) +
2D Compatibility (PS) -8989 + (NN) -3049 + (LL) 208
1D Compatibility (HY) 2000 + (ID) 300
Total energy: -6031.0 ( -13.25 by residue)
QMean score : -0.020
(partial model without unconserved sides chains):
PDB file :
Tito_4MQW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MQW-query.scw
PDB file :
Tito_Scwrl_4MQW.pdb
: