Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPDIINPNFSVWVNASAGTGKTKILIDRVLRLLLENKRNIFCLTFTNAAANEMESRIHNILSKWAVCSDNELIASLEQLDLSLLLLQHHYPPSHPFLSSQCLTLRSRWPQTKNSEVFNHYLIQARRLFSELENLDLTIQTVHAFCYKLISSFPAEAGIVPNCTLSECKELHSIVFDKLLHNEAVQDSIKFIAAEVDENKLRDLLYTLCIKRSVSANNLEYVKGKLSAPDEIHGLQSEATEQIERLAEILSKGSKRDRNYSKMLDLTSSSFIQVADTRIQKLDSSATRWNDISIENLVKVFLKSESCEKKSISSIITKSTLEKFPGAEQVIENIQNAVFT-----HVRDINSYQIFKRTSSFLDIFKVYIDLYNSEKSKNALLDYNDIIDLATNLLSNPDYKN------WVLFNLDQKIDHILVDEAQDNSISQWKIIANLCDEFFIRNDEKRTLFVVGDVKQSIYRFQGANPHLFNCMQQYFHTKSGGKDWISCQLEKSFRSTPETLTLVDRLFNNFREEISFVDSEIKHIPYRENDQGYVEIWPLLPRCKEEEQQALQIHLMHRKDY-IITDRLLAQAIAHKIHNWLNEG-RILVAK---NRHIEPRDIMILVRQRNMLVDYVISELKKANIPVVG---RDYFRIMDYIAVQDLIALTEFLLL--PTNDLALANALKSPLFNFTEDDLFNIAYDRKEQSLWERLQNY------SEDIYSKLNDLIN-------LSHIESPLTLFTHILRTGK-KKFAARL--GLECFEVLDEFMNLVLQFENPSLQAFVQWIK--ENNPEIKNDMQSER------NAVRIMTIHKSKGLQAPIVFLV----DTNTVPKNSESIVLD---AMGAPFLCGKNNNAYCD----QVKREKKLEDYNEYLRLLYVALTRAEDELYILGKEPVQKGSWYDIITKYGEPYEKKYMELHQIFKEKVEVLCVNANYPYIYKKRDYFNIPAVLPPPNLSILFQHSPSPSQYPLLSPQCFDTGIHSFSPLDSSVTHWDDKKRNTWMTDGYTRGLIIHSILQYMPKIEKDRRKNWIGKYLDNINIRKNKDEIYRKILAFNEKYDYLFDLDGKSEITLSGTINGKPVLVRLDKLCITQDKAIIIDYKSHRNVSVSSLNEIKKQMLIYKTLVQEICPNKQVECMVIWVEDLTIQSDF |
| 4CEJ Chain:A ((311-882)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAKKLLEKLKTDYFTRSPEQHLKSLAEMKPVIET--LVQLVISYGKRFEAAKQEKSIIDFSDLEHYCLAILTAENDKGEREPSEAARFYQEQ-FHEVLVDEYQDTNLVQESILQLVTS----GPEETGNLFMVGDVKQSIYRFRLAEPLLFLSKYKRF-TESGEGTGRKIDLNKNFRSRADILDSTNFLFKQ------LMGGKIGEVDY--DEQAELKLGAAYPDNDETETELLLID-------ELETVQFEAKAIAKEIRKLISSPFKVYDGKKKTHRNIQYRDIVILLRSMPW-APQIMEELRAQGIPVYANLTSGYFE-----AVEVAVALSVLKVIDNPYQDIPLASVLRSPIVGADENELSLIRLENKKAPYYEAMKDYLAAGDRSDELYQKLNTFYGHLQKWRAFSKNHSVSELIWEVYRDTKYMDYVGGMPGGKQRQANLRVLYDRARQYESTAFRGLFRFLRFIERMQERGDDLGTARGLSEQEDVVRLMTIHSSKGLEFPVVFVAGLGRNFNMMDLN-KSYLLDKELGFGTKYIHPQLRISYPTLPLIAMKKKMRRELLSEELRVLYVALTRAKEKLFLIGSCKDHQKQLAKWQASASQTDWLLPEFDRYQARTYLDFIGPALARHRDLHADISGHPARFAVQMIHSYDLLDERMEEKSERLEAIRRGEPVPGSFAFDEKAREQLSWTYPHQEVTQIRTKQSVSEIKRYRRPAFMMKKGLTAAEKGTAMHTVMQHIPLSHVPSIEEAEQTVHRLYEKELLTEEQKDAIDIEEIVQFFHTEIGGQLIGAKWKDREIPFSLALPAKEIYPDAHEADEPLLVQGIIDCLYETEDGLYLLAYKSD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CEJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201031 for 3454 contacts (-58.2/contact) +
2D Compatibility (PS) -53959 + (NN) -27138 + (LL) 27300
1D Compatibility (HY) -41200 + (ID) 7650
Total energy: -303678.0 ( -87.92 by residue)
QMean score : 0.415
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