Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYIDIIKSRLLLSDIVGKKVRLTKRGDSFVGFCPFHSEKTPSFLVSNTKGSYHCFGCSAHGDVFNFISQTEGLSFKEALERLASVVGVELPKTLNLAKENGELFSTLNLAASWFVQKNQGIIA-----YLKQRKISPKIIDKFKVGYAPSSGLKEYLNSLGIED---KILIDVGLINKN--SRDYFCNRLIFPIYNIAGKVIGFGGRALSSKQQPKYLNSPESQLFKKRENLYGLNFALSEIHKKQHVFVVEGYMDVIALHQTGISNIVAPLGTAISAEQIKSLWKFAKEISICMDGDSAGRNAAIRVAELVLPILEPGYTLKFVTLPTDKDPYDVCNELEHKKETVLSALDHSTKLHSEYLWHYIIGSNLQNYEKLAPEKYSILERKFMEYVNAIGNSSIRRYYRDYFYDKASELRNSFKKQVFNNKTRATKSEYLYNKSPELIEAEQNQAIILRITLEFPEILNHPIYFEQFSHFEFTNVKIKRLQQHIINVANNGSELNKEVLLQELEQFNVDGTIKLIFEKTSILNSQLNNGKSAKTVWNNIVLRGELNVLQRERIEARLGGDFGLEERLIEQIEQIESNIREMQMEFIQK |
| 3B39 Chain:A ((3-318)) | -------------------------------------------------------------------------------------------------AHQRQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPP-GWDNVLKRFGGNPENRQSLIDAGMLVTNDRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWCALETALPYMTDGRQLRFMFLPDGEDPDTLVR--KEGKEAFEARMEQAMPLSA-----FLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170145 for 2401 contacts (-70.9/contact) +
2D Compatibility (PS) -31997 + (NN) -7891 + (LL) 21300
1D Compatibility (HY) -22800 + (ID) 5250
Total energy: -216783.0 ( -90.29 by residue)
QMean score : 0.534
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