Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKSQLVKKVFDSVAYRYDIMNDIISLGIHRLWKDKMVNSVHFTKNSQVLDVAGGTGDIAIRIVRREPSVQVTVCDINQNMLSRGRNKAINS---NQLNFNWVCANAESLPFEDSEFDCCTIAFGIRNVSDRKKALSEIHRVLKPNGQFICLEFAPMHYKNEIFTKLYDLYSLKVIPKIGNIVTKDESPYQYLVRSIREFPVQTDFKMEIEEVGFKKVKFHNMSYGIVALHTGTK |
3BUS Chain:A ((51-167)) | ----------------------------------DEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSY--ADAMDLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTSTVDISAQARPSLVKTAEAFENARSQVEPFMGAEGLD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3BUS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -71939 for 882 contacts (-81.6/contact) +
2D Compatibility (PS) -12430 + (NN) -4771 + (LL) 3036
1D Compatibility (HY) -8000 + (ID) 1850
Total energy: -95954.0 ( -108.79 by residue)
QMean score : 0.457
|
|
|