Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNIKTISVKDNNVRLDRYIRRIFPNLKQSVIEKSLRRGLIKVNDCKAKSSDRVNSGQIITIKYLDYIENANSDCKHNEKLVELLRSNILYEDEYILAINKPAGVIVQGGI-----KVKISISDLLDQVREGETFKIVHRLDRDTSGAIIFARNANVARYLMEEFKGRRVKKTYLALTSGIPSKNRGVIDYPLVKKYVSGQEKVVIDKNSPQDATTRFSIIAKFKLNKPLVQRPIIQVADTQLYEHCNLSLSRVCHLSSLSSCYSSALLCHLSAPILVSSKTDHKQAHYTTFSIKKLDSSIMCRNDTRSVAYLKLQPITGRTHQLRTHLAYINCPILGDGKYGGKKAFVDGIASKIHLHSYSLSLKLPNNKKITITAPLPEHIKKSIEALHTPF |
| 1V9F Chain:A ((76-220)) | ----------------------------------------------------------------------------FEPQDIPL---DIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAG-GTVDEPISRHPTKRTHMAVHPMGKP--AVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRADFEEHKDEVDWL-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V9F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48147 for 843 contacts (-57.1/contact) +
2D Compatibility (PS) -14961 + (NN) -3871 + (LL) 9724
1D Compatibility (HY) -8000 + (ID) 1950
Total energy: -67205.0 ( -79.72 by residue)
QMean score : 0.292
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