Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLITLTYNNFKQYAQQGTVPAVEQNNGSKVLQNSFYKSVYYINSVLWPIKGMLVGVKHDLNTSGITMG---RREKVVWGT-----DAMIAILALQIYYLYSIQELHILCTCQKNYFHISKEQKARNLS
3Q3W Chain:A ((75-111))
--------------------------------------------------------------SFENFGSGSSREHAPWALVDYGIRAIIAPSFADIFKNNALGNGLLTIELAKDEVLEIVDELKKSQD
General information:
TITO was launched using:
RESULT:
Template:
3Q3W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12352 for 134 contacts (-92.2/contact) +
2D Compatibility (PS) -2750 + (NN) 3073 + (LL) 4156
1D Compatibility (HY) 800 + (ID) 450
Total energy: -7523.0 ( -56.14 by residue)
QMean score : -0.245
(partial model without unconserved sides chains):
PDB file :
Tito_3Q3W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q3W-query.scw
PDB file :
Tito_Scwrl_3Q3W.pdb
: