Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPEVTKLDNGLRIITEQMRDIDSVALNIRVGVGSRAESANQNGISHFLEHMAFKGTKTRTAFEIAKTFDDIGGVFNASTGRERTSYYAKVLKKDVKIGIDILIDILMNSTFPKDELEREKGVVIQEIFQINDSPSDIIFDKYFEAAYKDQPFGRSILGTQDTVKSFAQGDLNNYINEHYFGENIIFAVAGNVEHEEIAQLTKDFL-------SKVSSQKLKESQNANCTGGEYLEHRKLDQVHLLIGFPSVSCHDDRYHTFQVLDSIL---------GSGMSSRLFQEVREKQGLAYSVYSFNSSYTDTGMLSIFAGTDSS--NLDKLLKSITTELKKLSTNDLREEEVNRVKERIKSQILMSRESVSSCAEALEHYYGNYNRYISKDELIEKTSAVTTADVKRAVEELLSKHEKTTLAAIGEIKSLPGYDKVVSMLRA |
1HR8 Chain:B ((10-432)) | ----SKLPNGLTIATEYIPNTSSATVGIFVDAGSRAENVKNNGTAHFLQHLAFKGTQNRPQQGIELEIENIGSHLNAYTSRENTVYYAKSLQEDIPKAVDILSDILTKSVLDNSAIERERDVIIRESEEVDKMYDEVVFDHLHEITYKDQPLGRTILGPIKNIKSITRTDLKDYITKNYKGDRMVLAGAGAVDHEKLVQYAQKYFGHVPKSESPVPLGSPRGPLPVFCRGERFIKENTLPTTHIAIALEGVSWSAPDYFVALATQAIVGNWDRAIGTGTNSPSPLAVAASQNGSLANSYMSFSTSYADSGLWGMYIVTDSNEHNVRLIVNEILKEWKRIKSGKISDAEVNRAKAQLKAALLLSLDGSTAIVEDIGRQVVTTGKRLSPEEVFEQVDKITKDDIIMWANYRL-QNKPVSMVALGNTSTVPNVSYIEEKLNQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HR8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152518 for 3362 contacts (-45.4/contact) +
2D Compatibility (PS) -42805 + (NN) -10168 + (LL) 336
1D Compatibility (HY) -26000 + (ID) 6600
Total energy: -237755.0 ( -70.72 by residue)
QMean score : 0.502
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