Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEWLISD-QLINYNYAVKFMEKKIQQIHNNSSDELVWLLQHPPLYTAGISATDDDVV-------EKLLPIYKTGRGGKYTYHGPGQRIIYLMLNLKKRNKCDIKLYIRELGSWIINVLKHFNIFGEFKEDRIGVWVNNNGVEEKIAAFGIRLRKWITYHGIALNFSPDLSHYKGIIPCGLKGYGVTSIKE-LGVKAPLFKLDNILKKEFYKIF
2QHV Chain:A ((1-205))
-MEFLVEDLGLVPYGEAWAYQKRVHREVVAGNRPPTLLLLEHPRVITLGRKATGENLLFPESWYRENGFELYWVERGGDVTYHGPGQLVGYPIFPVGR----EVRRFLRQIEEAIVRVAAGYGISAYPTPGYAGVWVG----EDKLCAIGVAVKEGVSFHGFALNVNTDLNDFTVIVPCGLKGKGVTSLEKLLGRKVPMEEAKARVVAAFAEVF
General information:
TITO was launched using:
RESULT:
Template:
2QHV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122611 for 1578 contacts (-77.7/contact) +
2D Compatibility (PS) -20837 + (NN) -7815 + (LL) 208
1D Compatibility (HY) -16800 + (ID) 3150
Total energy: -171005.0 ( -108.37 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_2QHV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QHV-query.scw
PDB file :
Tito_Scwrl_2QHV.pdb
: