Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCFWYHSSKKAARKEEKIDYLDNKLKMFRNIEFIVSAISLAPLIACVFCPVLSEFGLVTLGVNFLVCFVGSLAFHMKHEKKSDNIEKAKEAVNSYNTPPSYFQNPDVGNSFPSASPYGSQYFPFY
1GXM Chain:A ((220-267))
--------------------------------------------------------------------VGVLAFLMTQPQTAEIEQAVRAGVAWFNSPRTYLEGYTYDSSLAATNPIVPRAGSKM
General information:
TITO was launched using:
RESULT:
Template:
1GXM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1749 for 203 contacts (8.6/contact) +
2D Compatibility (PS) -5156 + (NN) -5452 + (LL) 6144
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -6915.0 ( -34.06 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_1GXM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GXM-query.scw
PDB file :
Tito_Scwrl_1GXM.pdb
: