Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKHKIKKRKLSRCTEHRLSMLKNLSISLINHEQIITTLPKAKELRPYVEKFITIAKNKNTLHGRRLLLSRLHNNKLVVDKLLNVLASRYQGCKGGYSRVMKFSTRKGDCASMAVIELVNRDVTAKGKVCDKNKEKNEVATKS
4CSU Chain:N ((1-121))
MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKT-DSVANRRLAFARTRDNEIVA-KLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK-------------------
General information:
TITO was launched using:
RESULT:
Template:
4CSU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25369 for 860 contacts (-29.5/contact) +
2D Compatibility (PS) -12959 + (NN) -3877 + (LL) 924
1D Compatibility (HY) -8400 + (ID) 2850
Total energy: -52531.0 ( -61.08 by residue)
QMean score : 0.425
(partial model without unconserved sides chains):
PDB file :
Tito_4CSU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CSU-query.scw
PDB file :
Tito_Scwrl_4CSU.pdb
: