Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFVPKKSKYRKVFKGRIKGNTKGGSTLSFGDYGLKTIEAGRVQSKHIETVRRVISRTLKRSGKIWIRIFPDTPISKKPTDVRMGKGKGSVEFWVFKAKPGRVLFEISSDVPMHLAKLALEKAMAKLPVKCKFISNYS
3J5L Chain:M ((1-132))
MLQPKRTKFRKMHKGRNRGLAQG-TDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDG-VPEELAREAFKLAAAKLPIKTTFVTKTV
General information:
TITO was launched using:
RESULT:
Template:
3J5L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60277 for 953 contacts (-63.2/contact) +
2D Compatibility (PS) -14214 + (NN) -6373 + (LL) -248
1D Compatibility (HY) -10400 + (ID) 3400
Total energy: -94912.0 ( -99.59 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_3J5L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J5L-query.scw
PDB file :
Tito_Scwrl_3J5L.pdb
: