Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKYNNIVKCPIITEKASFLREKFNKYSLYVFVNVNKHKIKSAIESLFNVKVSSINVVRVKPKYRRFKGVVGYEKKKKKVYFSLMDGQKLDIMSV
3J45 Chain:T ((10-94))
------VLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGG
General information:
TITO was launched using:
RESULT:
Template:
3J45.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21208 for 532 contacts (-39.9/contact) +
2D Compatibility (PS) -8813 + (NN) 2022 + (LL) 408
1D Compatibility (HY) -2400 + (ID) 1600
Total energy: -31591.0 ( -59.38 by residue)
QMean score : 0.267
(partial model without unconserved sides chains):
PDB file :
Tito_3J45.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J45-query.scw
PDB file :
Tito_Scwrl_3J45.pdb
: