Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTSLIVGLAFFVGFIFSYKLLKKVIKNALNDKRNKSKLTNEEIEKFRRDMLEYYKKSSEKYKKLDEEVNKMMNEAFDKADSIIKHNRKQLDRTLDDNARSYLEKVTDQVEKAIGDLQANTANIAADAVKKIMQEHKDDKRSSEVISSFSRNLNKKLH |
2DHR Chain:A ((411-461)) | ---------------------------------------------------------SEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERV----AETLLERETLTAEEFQRVVEGLPLEAPE-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5622 for 207 contacts (27.2/contact) +
2D Compatibility (PS) -5569 + (NN) -3075 + (LL) 7000
1D Compatibility (HY) -2800 + (ID) 750
Total energy: 428.0 ( 2.07 by residue)
QMean score : 0.345
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