Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIVLATGGTGGHIFPAITLARAIKRQGYDSILFADKKTGK---NTD-V-KDYTLPLNKPGGNKFRFFLLLIYSCVLALYQIRKLKPKLVIGFGGYASFPTLLAAKVLSIPIILHEQNAVLGRVNKFFFNSAELIATSFPETKYAK--GNKCVFIGNFVDIKAKSHS-----STKKILTVLIIAGSQGANFFDDVVSSVICNLPIEIRKKIRVVQQCMKKNMNKVEGLYKGGQVICELSEFFDDMGSRLTDAHLVISRAGATSIAEITLARRPAIYIPYPCSKDDHQFYNAEYIKDSGAAVVVEQNSEVKKNLTKLLVNLLGDSQKLRDMANNTKKIRIKNGVTEFIRIVIHKLG |
| 3S2U Chain:A ((3-355)) | GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQ----------APLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAVAGTANRSLAPIARRVCEA---FPDTFPA---RLTTGNPVRGELFLDAHARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPLE-IRPAIR-HQAGRQHAEITAERYRTVAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVP-----DDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACLEVA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218638 for 2874 contacts (-76.1/contact) +
2D Compatibility (PS) -33947 + (NN) -11043 + (LL) 68
1D Compatibility (HY) -11600 + (ID) 4550
Total energy: -279710.0 ( -97.32 by residue)
QMean score : 0.530
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