Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEVNILDKKWYSIVEDPKGFTLNIINASLKELKIDQYKPNISIALADDNLLHQLNLRFRQMNKPTNVLSFPCEQLSSECDLGDIAISIDTVRKESDEYHIPIPAHVAHMLVHGLLHLLGYDHQKKGEEVVMKNLEGKILASLGYNMCAI
1TVI Chain:A ((34-113))
-----------------------------------------VNVILVSEDEIKELNQQFRGQDRPTDVLTFP---LMEEDVYGEIYVCPLIVEENAREFNNTFEKELLEVVIHGILHLAGYDHEFEDKNSKEMFEKQKKYVEEVWGEWRS
General information:
TITO was launched using:
RESULT:
Template:
1TVI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32576 for 516 contacts (-63.1/contact) +
2D Compatibility (PS) -8142 + (NN) -1265 + (LL) 3200
1D Compatibility (HY) -6800 + (ID) 1300
Total energy: -46883.0 ( -90.86 by residue)
QMean score : 0.294
(partial model without unconserved sides chains):
PDB file :
Tito_1TVI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TVI-query.scw
PDB file :
Tito_Scwrl_1TVI.pdb
: