Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVKTSGPSKGREISVEVINTSDVFFKDNSTRYKVFYVNKNMILVMKQILKNAVEGTIEELEKGIKRLQN-----RSTKPKKEIEKNQRW
3VR3 Chain:A ((145-198))
------------------------------------YVDETKIIQHKIMVPNGIKGTVQKIESGSFTIDDPICVIETEQGLKELTMMQKW
General information:
TITO was launched using:
RESULT:
Template:
3VR3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10583 for 198 contacts (53.4/contact) +
2D Compatibility (PS) -4988 + (NN) 4380 + (LL) 2012
1D Compatibility (HY) -3200 + (ID) 650
Total energy: 8137.0 ( 41.10 by residue)
QMean score : 0.124
(partial model without unconserved sides chains):
PDB file :
Tito_3VR3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VR3-query.scw
PDB file :
Tito_Scwrl_3VR3.pdb
: