Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRKIILQLLISIVIIFTLASAFVFVVVCINKGKPERKDKLYEIDAAHSSWVQTIAYYLVKPILESALDRYIEKHGLIEYLKEIIQQKVEKGSINFYEIIEGSGSRAFCGQEVVLQMYKISDNLATPLPLPKQTSDVTLVIGQDNQREVGLGVIGMKEGGERVVTINNIANKNEVNFNSYYIKLIEVKDKYPDSVNSMMIFNELINKTGKQVKCGDRVSVKYSLMGHDGEYII----KNQTVQFKVGNKKVPLAMELGVIGMKEGNNRTIISPPELLNVTDDMLIENIDFDEESVSIISLSLDDKQEIAAHHSTVE |
| 3UF8 Chain:A ((101-183)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAAGVIPPNATLVFEVELLDV-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29417 for 480 contacts (-61.3/contact) +
2D Compatibility (PS) -8635 + (NN) -3329 + (LL) 16464
1D Compatibility (HY) -1600 + (ID) 1200
Total energy: -27717.0 ( -57.74 by residue)
QMean score : 0.354
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