Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MINHLALNTPYFGILLSVIPFFLATILFEKTNRFFLFAPLFVSMVFGVAFLYLTGI---PYKTYKIGGDIIYFFLEPATICFAIPLYKKREVLVKHWHRIIGGIGIGTVVALLIILTFAKLAQFANDVILSMLPQAATTAIALPVSAGIGGIKELTSLAVILNGVIIYALGNKFLKLFRITNPIARGLALGTSGHTLGVAPAKELGPVEESMASIALVLVGVVVVAVVPVFVAIFF |
1Q90 Chain:G ((4-30)) | --------------------------------------PLLCGIVLGLVPVTIAGLFVTAYLQYL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q90.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4957 for 79 contacts (-62.7/contact) +
2D Compatibility (PS) -2479 + (NN) -1429 + (LL) 18784
1D Compatibility (HY) -4000 + (ID) 350
Total energy: 5569.0 ( 70.49 by residue)
QMean score : -0.262
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