Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNLETYFKNSQPLNEYIDGMKTNQDTVLSIYQSFE---LPED-DSRIKKIKEMNYSKVLVITEDWCGDAMMNLPILKHISEAL-NLEVRVFHRDDDTKLIDQYLTNGKSRAIPIFVFLNDQFEQETVWGPRANEVQKFVTDVRADKLPSKDHPDYADLEKETHLVISNRYKTDASFWKAVYNSILNKLENK
1Z6N Chain:A ((21-121))
-------------------GLATEQGAVARFRQKLESNGLPSALTERLQRI-ERRY-RLLVAGEMWCPDCQINLAALDFAQRLQPNIELAIISKGRAEDDLRQRLALERI-AIPLVLVLDEEF---------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Z6N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54765 for 612 contacts (-89.5/contact) +
2D Compatibility (PS) -10219 + (NN) -1038 + (LL) 5652
1D Compatibility (HY) -7600 + (ID) 1500
Total energy: -69470.0 ( -113.51 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_1Z6N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z6N-query.scw
PDB file :
Tito_Scwrl_1Z6N.pdb
: