Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIVEVEHQRQGVDLIKIDNDE-TKIIFTNYGARVVSWKYHDNNIVLGNVVEADEFYHSNPFKFGASIGRYSGRIDNAKFKLKGKEYQLEKNNGEHHLHGGCHGLDNKLFDYEIRNEIAQIKVIFKTVLKSADDHFPGDIDVTITHIYDADHQWSIEYEAVASEDTLFSPMNHVYFNLNRD-NNVVDNH--RISSNQLDMYVLDERNIVTGDILDLHEV---FEDNKIKLSDIFTSQHAQLSQQMTRFGGLDHPFTVGEHKMYVENHEFMLE-----VDTDMPHVVFFTFNQPDEWDSPFNIYKP--HSGFTLETQFLPNDINLYGEKAPSI----LKAGEVFNSKTSFRIEEKVEND |
1MMX Chain:A ((2-340)) | -SIKIRDFGLGSDLISLTNKAGVTISFTNLGARIVDWQKDGKHLILG-FDSAKEYLEKDAYP-GATVGPTAGRIKDGLVKISGKDYILNQNEGPQTLHGGEESIHTKLWTYEVTDLGAEVQVKFSLVSNDGTNGYPGKIEMSVTHSFDDDNKWKIHYEAISDKDTVFNPTGHVYFNLNGDASESVENHGLRLAASRF-VPLKDQTEIVRGDIVDIKNTDLDFRQEK-QLSNAFNSNMEQV--QLVK--GIDHPFLLDQLGLDKEQARLTLDDTSISVFTDQPSIVIFTANFGD-LGTLYHEKKQVHHGGITFECQVSPGS-----EQIPELGDISLKAGEKYQATTIYSLHTKL--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1MMX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -97361 for 2698 contacts (-36.1/contact) +
2D Compatibility (PS) -34973 + (NN) -8465 + (LL) 712
1D Compatibility (HY) -24000 + (ID) 5900
Total energy: -169987.0 ( -63.00 by residue)
QMean score : 0.424
|
|
|