Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKLEVGQLAPDFRLKNSDGVEISLKDLLHKKVVLYFYPKDNTPGCTLEAKDFSALFSEFEKKNAVVVGVSPDNSQSHQKFISQCSLNVILLCDEDKKVANLYKAYGKRMLYGKEHLGIIRSTFIINTQGVLEKCFYNVKAKGHAQKVLESL
3IXR Chain:A ((25-153))
-----------------------TLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKEKTMY--QVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKL
General information:
TITO was launched using:
RESULT:
Template:
3IXR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72405 for 930 contacts (-77.9/contact) +
2D Compatibility (PS) -13930 + (NN) -5292 + (LL) 1408
1D Compatibility (HY) -9600 + (ID) 2400
Total energy: -102219.0 ( -109.91 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_3IXR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IXR-query.scw
PDB file :
Tito_Scwrl_3IXR.pdb
: