Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIVIDLMGADHGVLPIIEGVSRALENKSFSVVLVGDKDKATPFISKELASKVEMIHTQ----DYIKMEEAATEAIKRKES--SIYLGMDILKNG-ADALISAGHSGATMGLATLRLGRIKGVERPAICTLMPSVGKRPSVLLDAGANTDCKPEYLIDFALMGYEYAKSVLHYDSPKVGLLSNGEEDIKGNTLVKETHKMLKAYDFFYGNVEGSDIFKGVVDVVVCDGFMGNVVLKTTEGVASAIGSIFKDEIKSSFKSKMGALMLKNAFGILKQKTDYAEYGGAPLLGVNKSVIISHGKSNARAVECAIYQAISAVESQVCLRITQAFESLKSQSFESQSDQQDA |
| 1GUD Chain:A ((125-226)) | ---IIDKLGAEGGEVAIIEG-------KAGNASGEARRNGATEAFKK--ASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GUD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26416 for 649 contacts (-40.7/contact) +
2D Compatibility (PS) -10047 + (NN) -133 + (LL) 11260
1D Compatibility (HY) -2400 + (ID) 1600
Total energy: -29336.0 ( -45.20 by residue)
QMean score : 0.367
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