Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKKMCLSLLMISGVCVGAKDLDFKLDYRATGGKFMGKMTDSSLLSITSMNDEPVVIKNLIVNRGNSCEATKKVEPKFGDKFKKEKLFDHELKYSQQIFYRLDCKPNQLLEVKIITDKGEYYHKFSK
1PZC Chain:A ((36-81))
-------------------------------------------------------------VDKGHNVESIKDMIPEGAEKFKSKINENYVLTVTQPGAYLVKCTPHYAMGMIALIAVGDSPANLDQ
General information:
TITO was launched using:
RESULT:
Template:
1PZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11074 for 231 contacts (47.9/contact) +
2D Compatibility (PS) -4575 + (NN) 1530 + (LL) 4228
1D Compatibility (HY) -1600 + (ID) 650
Total energy: 10007.0 ( 43.32 by residue)
QMean score : 0.197
(partial model without unconserved sides chains):
PDB file :
Tito_1PZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PZC-query.scw
PDB file :
Tito_Scwrl_1PZC.pdb
: