Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRMKPIFLLIFLLLASLIAREKDASSNLFDLIDKGINREQELKEQEQKTRLKLAQSPLVALEIVPQETPYLEWQGARESYYLKVSAVVESVVILKIDINQGRSCSLYPTPKSVSLVRNQSVAYEILCENQPLWIEVSTNLGKRTFQF
5A58 Chain:A ((693-745))
----------------------------LYKLTDQGKTEEQELTVKDGKITLDLLANQPYVLYRSKQTNPEMSWSEGMHIYDQGFNSGTLKHWTISGDASKAEIVKSQGANDMLRIQGNKEKVSLTQKLTGLKPNTKYAVYVGVDNRS
General information:
TITO was launched using:
RESULT:
Template:
5A58.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6409 for 216 contacts (-29.7/contact) +
2D Compatibility (PS) -5175 + (NN) 3894 + (LL) 2752
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -7738.0 ( -35.82 by residue)
QMean score : 0.192
(partial model without unconserved sides chains):
PDB file :
Tito_5A58.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5A58-query.scw
PDB file :
Tito_Scwrl_5A58.pdb
: