Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRYIDDGLENQTILITGGAGFVGSNLAFYFQENHPKAKVVVLDKFRSNTLSSNNRPSSLGHFKNLIGFKGEVIIADINNPLD-----LRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKAPNIVGSN-ESPENVYGFSKLCMDEFV---LSHSSDNVVGLRYFNVYGSREFYKEKTASMVLQLALSAMAFKEVKLFEFGEQL-RDFVYIEDVIQANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLGDFKVSYIKNPYTF---FQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAIFKEQHA |
2X86 Chain:A ((48-354)) | -----------MIIVTGGAGFIGSNIVKALNDKGI-TDILVVDNLKDGT-----------KFVNLV----DLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLN-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X86.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157080 for 2442 contacts (-64.3/contact) +
2D Compatibility (PS) -30832 + (NN) -6649 + (LL) 1340
1D Compatibility (HY) -19600 + (ID) 4800
Total energy: -217621.0 ( -89.12 by residue)
QMean score : 0.445
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