Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLSQALNKAKKELSPKGFRGGLESEILLGFVLQKERVFLHTHEHLELSHEEETRFFELVGKRLNDCPIEYLLGSCDFYGRSFFVNEHVLIPRPETEILVQKALNIISQYHLKEIGEIGIGSGCVSVSLALENPNLSIYASDISPKALEVALKNIERFCLKERVFLKQTRLW----DHMPTIEMLVSNPPYIARNYPLEKSVLKEPHEALFGGVKGDEILKEIVFLAAKLKIPFLVCEMGYDQLKSLKECLEFCGYDAEFYKDLSGFDRGFVGVLKSFLR
1VQ1 Chain:A ((58-282))--------------------------------IRKEDLFL---KDLGVSPTEEKRILELVEKRASGYPLHYILGEKEFMGLSFLVEEGVFVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVA-KFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPYVKSSAHL-----FEPPEALFGGEDGLDFYREF-FGRYDTSGKIVLMEIGEDQVEELKKIVS----DTVFLKDSAGKYRFLLLNRRSS--


General information:
TITO was launched using:
RESULT:

Template: 1VQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105044 for 1625 contacts (-64.6/contact) +
2D Compatibility (PS) -22902 + (NN) -5209 + (LL) 3240
1D Compatibility (HY) -21600 + (ID) 4500
Total energy: -156015.0 ( -96.01 by residue)
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_1VQ1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VQ1-query.scw
PDB file : Tito_Scwrl_1VQ1.pdb: