Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAVSSINQFDSNLYGLLNAKSAPKEDLAPIEGAEKIEREKKDAPTENLPFNPDKRETYGFLVLELMSDREYEAFLRATAGMDESQKRLAAQSLYSLTDFYNGKFSKEVENAPKQPVNGLHKKAFQTFNATNHNAFLQRYQNAYNNPSSMDVVL |
4DJA Chain:A ((196-242)) | ----------------------------PVFAPDKITKEVIDTVERLFPDNFGKLENFGFAVTRTDAERALSAFIDDFLCNFGATQDAMLQDDPNLNHSLLSFYINCGLLDALDVCKAAERAYHEGGAPLNAVEGFIRQIIGWREYMRGIYWL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4DJA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 12756 for 229 contacts (55.7/contact) +
2D Compatibility (PS) -5113 + (NN) -1577 + (LL) 1644
1D Compatibility (HY) -1600 + (ID) 750
Total energy: 5360.0 ( 23.41 by residue)
QMean score : 0.290
|
|
|