Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVSLYLENGLFLQAQSFGASGTQVGELVFNTSMSGYQEVISDPSYKGQFVVFSMPEIGVVGANPKDDESF-FSCAGVLARHYNEFFSNSRADSSLSTYLKKRGVLGISGVDTRSLIKTLR----HHGCLMMIASTIEHDRNKLEEVLKNAPKISHSPLVSSVSTPKIITHQRATFDFNT-LDYKPFDEKIPHKIIAVLDFGAKGNILNELQNVGLKALIYPHHTKANELIKAYEKKEISGIFLSNGPGDPLSLQQEIGEIKRLINAKIPMFGICLGHQLLSIAQGYPTYKLKFGHHGSNHPVKNLETNAVEITAQNHNYCVPEE-IEEIATITHRNLFDNTIEGVRYKNAPIISVQHHPESSPGPKESHYIFKEFVGLLEGF |
| 1T36 Chain:B ((7-377)) | ---LVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCI--IAGDNPDAALALEKA-RAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVA-YDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNP----DGIFLSNGPGDPAPDDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1T36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -141896 for 3322 contacts (-42.7/contact) +
2D Compatibility (PS) -39672 + (NN) -21375 + (LL) 1592
1D Compatibility (HY) -29200 + (ID) 7600
Total energy: -238151.0 ( -71.69 by residue)
QMean score : 0.492
|
|
|