Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNVFFKQQKFVIKKRFNDFNGFDIEENEVLWFELINPTPNELATLSQEYAIHYNTDH----SQRVSSVTKYWEDSSSVTINAFFTNQDENETFHMEMATFILSNNILFTIYYGTLEIFDSIQKKVLASPKKFEDGFDILTKIFEVYFEKGVECLEW-----INKQTSLLRKNIIFKET-------STHD-DILVRLSNLQEFNVALRDSFFDKRRIITALLRS--NKVDSDTKNNLNIILTDFSSLVESTTVNLNSLDNIQNLFASQVNVEQNKIIKLFTVATMAMMPPTLIGTIYGMNFKFMPELEWQYGYLFALIVMAISTILPVIYFKKKGWL |
| 4CY4 Chain:A ((24-317)) | -------------------------EDYRLIWIDCYDPKDEELYKLSKKIGISVSDLQIGLDEQEIPRVEED-EDFYLIIYKAPLFEEDITTT---SLGIYI-KNNLLLTIHSDKIKAIGRLHK--LISTKKPR-----------IVFERGIGFLLYHILNEITRSYSRILMNLEDELEELEDKLLAGYDREVMEKILGLRKTLVYFHKSLIANRDVLVLLKRKYLPITTKEDRENFEDLYYDTLQLIDMSATYREVLTSMMDITLSLENIKMNQIMKILTMVTTIFAVPMWITGIYGMNFSYLPLANNPQGFWLVMALMVVIIMIFVYIFRRSGWI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3073362 for 34453 contacts (89.2/contact) +
2D Compatibility (PS) -26736 + (NN) -4670 + (LL) 3732
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: 3041438.0 ( 88.28 by residue)
QMean score : ?
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