Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNELLKIFLSMALTSVILIPLVWILRRIFNRYLSKGKIYYSWLIVFFFLTIPFAYIFFSFTKDNAFMWRNKTEFDGVTSIVMDQSGIVLQHDFKTVFWMTVLDYIWVAWLVIFLLTFIYRIASYRNFKKYVFSGARRVDDLEQLDILAETIEELNIKRPVELMINPLISSPIFLGLKKNVIVIPDETFSNVELHYIFKHELVHCKRKDMYYVWMVQFFTCIYWFNPLMYLMNKRIQMDRELACDEAVLATLSKSKYIGYGDTLLSSLAKSGNYKESYVAVSLHENTKALKERLMFIANYKAQNKKHNILFSISMIVLCIVGVLFSAFQADVFTLEKKKGITIERRK |
1YFR Chain:A ((99-158)) | ----------------------------FGDYFKKEAIEYAWEFVTEVLKLPKEKLYVSVYKDDEEAYRIWNEHIGIPS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18023 for 266 contacts (-67.8/contact) +
2D Compatibility (PS) -5177 + (NN) -211 + (LL) 28276
1D Compatibility (HY) -3200 + (ID) 800
Total energy: 865.0 ( 3.25 by residue)
QMean score : 0.018
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