Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTLKGKYNEAKVFTDNVDDNTIGQIITLCNQPFAKDSKIRIMPDTHGGKGCVIGTTMTIQDKIVPNLVGVDIGCGLYVVKLKPGKLKMDFDKLDKVIRERVPSGSKTHDKPVDEFDLEGIVAPIHHGWVARSIGTLGGGNHFIEVNQGSDGIYLVIHSGSRVLGKEIAEYHQEVAYKRLDILRKELKLDATAAKKRGNLEMANNLNGEREQVKLDYDLSYVTGVDLKNYLNDMEIAQKFAARNRYVMAQIILKAMKWDKAVVSAFDCVHNYIDIEHNMLRKGATSAQLGEQIIVPLNMREGSILATGKGNADWNYSAPHGAGRMLSRSKAKAQISLESYQAAMKDVWTTSVSKKTIDEAPKAYKSAKQLLADVEDTMEIQEIIKPLYNFKA |
| 1GH8 Chain:A ((8-58)) | -------------------------------------------------------------------------------IKVMPESPDVDLEALKKEIQERIPEGTELHK--IDE-------EPIAFGLVALNVMVVVG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10829 for 289 contacts (-37.5/contact) +
2D Compatibility (PS) -5573 + (NN) -3241 + (LL) 23604
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -1389.0 ( -4.81 by residue)
QMean score : 0.532
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