Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAYPFNHKEFVAMMEQ----YNLKSNSITIPEHTILNDLVTENRDCVYLLKSGILAGYIDF-DNDKIYSIFTSNFFMGYYTIFDNSSLVLTYQTLTECELIIYKKKDIEYSLSLFPENFSFQYTIMRTIAKHGYYKSL---LQYRDKKDQLAFVFEMLVKILDIPVEDGVAVLPKSISTTVIKNYCTLSKAFFYSQLKELKEAGIISKVKLQWRINM-EALSEKNNSIN
3E97 Chain:A ((10-224))
-----RSPLFQNVPEDAMREALKVVTERNFQPDELVVEQDAE-GEALHLVTTGVVRVSRVSL-RERVLGDIYAPGVVGETAVLAHQERSASVRALTPVRTLMLHREHFELILR---RHPRVLWNLAEMLARRVTFLNDELIAFGQNTEAALTHVFANLYRQRLAAG--VPQPEVLPLGTQDIMARTSSSRETVSRVLKRLEAHNILEVSPRSVTLLDLAALEALS----
General information:
TITO was launched using:
RESULT:
Template:
3E97.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126597 for 1493 contacts (-84.8/contact) +
2D Compatibility (PS) -21516 + (NN) -2153 + (LL) 492
1D Compatibility (HY) -800 + (ID) 1200
Total energy: -151774.0 ( -101.66 by residue)
QMean score : 0.382
(partial model without unconserved sides chains):
PDB file :
Tito_3E97.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E97-query.scw
PDB file :
Tito_Scwrl_3E97.pdb
: