Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWKLALCQTDVVFKYPDANYARIEKAIVEAAKNGADIAVLPEMWN-TGYALNELAGVADLNGGRTKEFLATLSEKHQIAIIGGSVSISEGTKFS---NTMYAFDKYGGLLSSYKKVHLFQL-------MNEHLYLEAGN------DKNLFRLDGVSCAGFICYDIRFPE---WIRKHTSEGSEVI-FVSAQWPAERVTQWEQLLIARAIENQTFVVAVNRVG-DDPNNHFNGHSLVIDPLGNIVVHGGEEEGNIYAEIDLNLVAETRGIIPVFTDRRPELY
1EMS Chain:A ((29-304))----------------EKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMATDCEYMEKYRELARKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTEMIPPVDTPIGRL-GLS----ICYDVRFPELSLWNRK---RGAQLLSFPSAFTLNTGLAHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPWGAVVAQCSERVDMCFAEIDLSYVDTLREMQPVFSHRRSDLY


General information:
TITO was launched using:
RESULT:

Template: 1EMS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105922 for 1812 contacts (-58.5/contact) +
2D Compatibility (PS) -26051 + (NN) -15033 + (LL) 1760
1D Compatibility (HY) -14000 + (ID) 4400
Total energy: -163646.0 ( -90.31 by residue)
QMean score : 0.377

(partial model without unconserved sides chains):
PDB file : Tito_1EMS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EMS-query.scw
PDB file : Tito_Scwrl_1EMS.pdb: